GERM - Partition Coefficients Database (KdD)

Geochemical Earth Reference Model (GERM) partition coefficients from both experimental and empirical data for all types of rocks, minerals, and elements.

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Updated on March 12th, 2021.
1.Contribution, contribution
12
Contribution metadata
Contribution Group
12
1.1Contribution ID, idIntegerUnique KdD Contribution ID
Download Only
Description:Unique KdD Contribution ID
Notes:Written during contribution activation
Type:Integer
Example:112
Validation:
Download Only
The value in this column is included in downloaded contributions, but is ignored in uploaded contributions.
1.0 Column:contribution.id
1.2Version, versionIntegerContribution version number
Download Only
Description:Contribution version number
Notes:1 for original contribution, 6 for latest contribution if there are 6 versions, empty if the contribution is not activated, written during contribution activation
Type:Integer
Validation:
Download Only
The value in this column is included in downloaded contributions, but is ignored in uploaded contributions.
1.0 Column:contribution.version
1.3Activation Timestamp, timestampTimestampDate and time of contribution activation
Download Only
Description:Date and time of contribution activation
Notes:ISO 8601 date and time (e.g. "yyyy-mm-ddThh:mm:ss.sssZ"), written during contribution activation
Type:Timestamp
Examples:2017
2014-04-21

1970-01-01T00:00:00

1969-07-20T22:56:15-04:00
Validation:
Download Only
The value in this column is included in downloaded contributions, but is ignored in uploaded contributions.
1.0 Column:contribution.timestamp
1.4Contributor, contributorStringContributor EarthRef handle
Download Only
Description:Contributor EarthRef handle
Notes:Written during contribution activation
Type:String
Example:@njarboe
Validation:
Download Only
The value in this column is included in downloaded contributions, but is ignored in uploaded contributions.
1.0 Column:contribution.contributor
1.5Is Validated, is_validatedFlagContribution has passed the KdD Data Model validation
Download Only
Vocabulary
Description:Contribution has passed the KdD Data Model validation
Type:String
Unit:Flag
Examples:f = False
t = True
Validations:
Vocabulary
Any values in this column must contain a value found in the Boolean Flags controlled vocabulary.

Download Only
The value in this column is included in downloaded contributions, but is ignored in uploaded contributions.
1.0 Column:contribution.is_validated
1.6Is Reviewed, is_reviewedFlagContribution has been reviewed for correct usage of the KdD Data Model
Download Only
Vocabulary
Description:Contribution has been reviewed for correct usage of the KdD Data Model
Type:String
Unit:Flag
Examples:t = True
f = False
Validations:
Vocabulary
Any values in this column must contain a value found in the Boolean Flags controlled vocabulary.

Download Only
The value in this column is included in downloaded contributions, but is ignored in uploaded contributions.
1.0 Column:contribution.is_reviewed
1.7Data Model Version, data_model_versionStringKdD data model version
Download Only
Vocabulary
Description:KdD data model version
Notes:Written during contribution activation
Type:String
Example:1.0
Validations:
Vocabulary
Any values in this column must contain a value found in the kdd_version controlled vocabulary.

Download Only
The value in this column is included in downloaded contributions, but is ignored in uploaded contributions.
1.0 Column:contribution.data_model_version
1.8Contribution Reference, referenceStringThe DOI or URL for the document describing this study
Required
Validation
Description:The DOI or URL for the document describing this study
Notes:The DOI must resolve to a publisher or the URL to a web page
Type:String
Examples:10.1029/92JB01202
10.1023/A:1015035228810

https://my-university.edu/my_phd_thesis.pdf
Validations:
Validation
Any values in this column shoud either contain valid DOI that is resolvable by doi.org or a valid URL that resolves to a web page. If you have a dataset associated with a paper that does not have a DOI (PhD thesis, master thesis, USGS report, etc.), MagIC can store the paper in the ERDA database (barring copyright issues) and mint a DOI for it.

Required
The values in this column must not be empty.
1.0 Column:contribution.reference
1.9Original Author, authorStringOriginal author EarthRef handle or name and email or ORCID
Validation
Description:Original author EarthRef handle or name and email or ORCID
Type:String
Examples:@cconstable
Not A. Member <no.earthref.handle@gmail.com>

0000-0002-9000-2100
Validation:
Validation
Any values in this column could contain a user's ORCID iD or an EarthRef.org user's handle. If neither are known, the column value should include the user's email address and the they will be contacted when the contribution is made public.
1.0 Column:contribution.author
1.10Laboratory Names, lab_namesListList of labs (with institution and country) where the measurements in the contribution were made
Recommended
Vocabulary
Description:List of labs (with institution and country) where the measurements in the contribution were made
Notes:European Labs use names from EPOS MLS
Type:List
Examples:Paleomagnetic Laboratory Fort Hoofddijk (Utrecht University, The Netherlands)
Paleomagnetic Laboratory (INGV, Italy)
Validations:
Vocabulary
Any values in this column must contain a value found in the Laboratory Names controlled vocabulary.

Recommended
The values in this column are recommended not to be empty.
1.0 Column:contribution.lab_names
1.11Supplemental Data Links, supplemental_linksDictionaryDisplay name for the link and the permanent URL to the supplemental data
Description:Display name for the link and the permanent URL to the supplemental data
Type:Dictionary
Examples:Geomagnetic Field Model[https://earthref.org/ERDA/1137/]
Geochemistry Data[https://earthref.org/ERDA/192/]:PADM2M Field Model[https://earthref.org/ERDA/1138/]
1.0 Column:contribution.supplemental_links
1.12Description, descriptionStringContribution description and update comments
Recommended
Description:Contribution description and update comments
Type:String
Example:Fixes errors in latitudes and adds measurement data
Validation:
Recommended
The values in this column are recommended not to be empty.
1.0 Column:contribution.description
2.Partition Coefficients, kds
10
Contribution Group
1
2.1Contribution ID, contribution_idIntegerUnique KdD Contribution ID
Download Only
Description:Unique KdD Contribution ID
Notes:Written during contribution activation
Type:Integer
Example:5412
Validation:
Download Only
The value in this column is included in downloaded contributions, but is ignored in uploaded contributions.
1.0 Column:kds.contribution_id
Classification Group
3
2.2Rock Types, rock_typesListColon-delimited list of rock types
Required
Description:Colon-delimited list of rock types
Type:List
Examples:Alkali Basalt
Andesite

Trachyte
Validation:
Required
The values in this column must not be empty.
1.0 Column:kds.rock_types
2.3Minerals, mineralsListColon-delimited list of minerals
Required
Description:Colon-delimited list of minerals
Type:List
Examples:Amphibole
Clinopyroxene

Plagioclase
Validation:
Required
The values in this column must not be empty.
1.0 Column:kds.minerals
2.4Element, elementStringElement
Required
Description:Element
Type:String
Examples:Na
Rb

Cs
Validation:
Required
The values in this column must not be empty.
1.0 Column:kds.element
Partition Coefficient Group
6
2.5Kd, kdNumberPartition coefficient
Required
Validation
Description:Partition coefficient
Type:Number
Unit:Dimensionless
Validations:
Required
The values in this column must not be empty.

Validation
The values in this column must contain a value greater than or equal to 0.
1.0 Column:kds.kd
2.6Kd Sigma, kd_sigmaNumberPartition coefficient uncertainty, One sigma
Validation
Description:Partition coefficient uncertainty, One sigma
Notes:Standard error or standard deviation at one sigma
Type:Number
Unit:Dimensionless
Validation:
Validation
The values in this column must contain a value greater than or equal to 0.
1.0 Column:kds.kd_sigma
2.7Kd Low, kd_lowNumberPartition coefficient, Low range
Validation
Description:Partition coefficient, Low range
Type:Number
Unit:Dimensionless
Validation:
Validation
The values in this column must contain a value greater than or equal to 0.
1.0 Column:kds.kd_low
2.8Kd High, kd_highNumberPartition coefficient, High range
Validation
Description:Partition coefficient, High range
Type:Number
Unit:Dimensionless
Validation:
Validation
The values in this column must contain a value greater than or equal to 0.
1.0 Column:kds.kd_high
2.9Kd Definition, kd_definitionStringPartition coefficient definition
Description:Partition coefficient definition
Type:String
Examples:Solid-Melt
Metal-Silicate-Solids
1.0 Column:kds.kd_definition
2.10Kd Types, kd_typesListColon-delimited list of partition coefficient types
Description:Colon-delimited list of partition coefficient types
Type:List
Examples:Experimental
Phenocryst-Matrix
1.0 Column:kds.kd_types