The study of water in minerals with infrared spectroscopy is reviewed with emphasis on natural and synthetic quartz. Water can be recognized in minerals as fluid inclusions and as isolated molecules and can be distinguished from hydroxide ion. The distinction between very small inclusions and aggregates of structurally bound molecules is difficult. New studies of synthetic quartz using near-infrared spectroscopy are reported. These demonstrate that water molecules are the dominant hydrogen containing species in synthetic quartz but that this water is not in aggregates large enough to form ice when cooled.