The effect of the Earth-ionosphere electromagnetic cavity on the spectrum of an atmospheric signal generated by a broadband electrical current source is analyzed numerically by means of the Transmission Line Matrix (TLM) method. Two new TLM meshes are developed, one with transmission lines connected in parallel and the other with connections in series. The equations describing propagation through these parallel or series meshes are equivalent to the Maxwell equations for TEr or TMr modes in the spherical Earth-ionosphere cavity, respectively. The numerical algorithm obtains Schumann resonance frequencies very close to the experimental ones, confirming that this methodology is a valid numerical tool for predicting these resonances on other planets and moons. Finally, the TEr and TMr modes with a higher order than the Schumann resonances are also analyzed, finding that the effect of atmospheric conductivity is to shift the peak frequencies toward higher values than the eigenfrequencies corresponding to the lossless system. For daytime conditions, these peak frequencies appear around 2, 4, 6, 8… kHz, connected to an effective aboveground ionosphere height of approximately 75 km. In the night region, the shift is slightly smaller and the effective ionosphere height is around 85 km in agreement with smaller values in the conductivity profile.